Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC011700.1-201ENST00000610409 2627 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 PSMD4P1-201ENST00000433951 1109 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 MRPL22P1-201ENST00000505398 616 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC138701.2-201ENST00000553634 226 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC027237.1-201ENST00000560942 655 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AC141586.1-203ENST00000567242 366 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
HOXD12P35452 AC107464.3-201ENST00000609172 737 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AL022334.2-201ENST00000610000 484 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AC084781.1-201ENST00000613737 656 ntBASIC14.39□□□□□ -0.11
HOXD12P35452 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXD12P35452 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXD12P35452 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXD12P35452 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXD12P35452 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXD12P35452 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXD12P35452 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXD12P35452 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXD12P35452 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.38□□□□□ -0.11
HOXD12P35452 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 AP000322.3-201ENST00000608665 388 ntBASIC14.38□□□□□ -0.11
HOXD12P35452 AC127024.7-201ENST00000625101 200 ntBASIC14.38□□□□□ -0.11
HOXD12P35452 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.38□□□□□ -0.11
HOXD12P35452 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HOXD12P35452 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HOXD12P35452 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HOXD12P35452 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HOXD12P35452 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HOXD12P35452 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms