Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTNNA1P35221 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.22■□□□□ 0.03
CTNNA1P35221 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.22■□□□□ 0.03
CTNNA1P35221 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTNNA1P35221 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.21■□□□□ 0.03
CTNNA1P35221 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.21■□□□□ 0.03
CTNNA1P35221 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AL136309.1-201ENST00000403917 691 ntBASIC15.21■□□□□ 0.03
CTNNA1P35221 FAM197Y7-201ENST00000432892 766 ntBASIC15.21■□□□□ 0.03
CTNNA1P35221 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 USP32P1-208ENST00000506594 1164 ntBASIC15.21■□□□□ 0.03
CTNNA1P35221 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.21■□□□□ 0.03
CTNNA1P35221 RN7SL713P-201ENST00000582127 302 ntBASIC15.21■□□□□ 0.03
CTNNA1P35221 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.21■□□□□ 0.03
CTNNA1P35221 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.21■□□□□ 0.03
CTNNA1P35221 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
CTNNA1P35221 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.21■□□□□ 0.03
CTNNA1P35221 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTNNA1P35221 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTNNA1P35221 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTNNA1P35221 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CTNNA1P35221 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTNNA1P35221 PCDHA5-203ENST00000614258 4248 ntBASIC15.21■□□□□ 0.02
CTNNA1P35221 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTNNA1P35221 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 AC098614.1-201ENST00000368528 745 ntBASIC15.2■□□□□ 0.02
CTNNA1P35221 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.2■□□□□ 0.02
CTNNA1P35221 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.2■□□□□ 0.02
CTNNA1P35221 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.2■□□□□ 0.02
CTNNA1P35221 AC007389.4-201ENST00000454674 793 ntBASIC15.2■□□□□ 0.02
CTNNA1P35221 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.2■□□□□ 0.02
CTNNA1P35221 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CTNNA1P35221 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CTNNA1P35221 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 AC006453.4-201ENST00000636949 1252 ntBASIC15.2■□□□□ 0.02
CTNNA1P35221 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.2■□□□□ 0.02
CTNNA1P35221 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTNNA1P35221 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CTNNA1P35221 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms