Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 AC106782.5-201ENST00000616011 337 ntBASIC15.71■□□□□ 0.11
CTGFP29279 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.71■□□□□ 0.11
CTGFP29279 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 AC138627.1-201ENST00000641127 1257 ntBASIC15.71■□□□□ 0.11
CTGFP29279 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTGFP29279 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.71■□□□□ 0.11
CTGFP29279 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CTGFP29279 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 RN7SKP212-201ENST00000410851 328 ntBASIC15.7■□□□□ 0.1
CTGFP29279 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.7■□□□□ 0.1
CTGFP29279 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.7■□□□□ 0.1
CTGFP29279 RN7SL672P-201ENST00000474091 317 ntBASIC15.7■□□□□ 0.1
CTGFP29279 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 PHBP18-201ENST00000546648 813 ntBASIC15.7■□□□□ 0.1
CTGFP29279 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC15.7■□□□□ 0.1
CTGFP29279 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 GRAMD4P6-201ENST00000556999 244 ntBASIC15.7■□□□□ 0.1
CTGFP29279 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC15.7■□□□□ 0.1
CTGFP29279 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.7■□□□□ 0.1
CTGFP29279 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.7■□□□□ 0.1
CTGFP29279 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.7■□□□□ 0.1
CTGFP29279 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTGFP29279 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.7■□□□□ 0.1
CTGFP29279 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CTGFP29279 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.7■□□□□ 0.1
CTGFP29279 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 AL590824.1-201ENST00000403828 1349 ntBASIC15.69■□□□□ 0.1
CTGFP29279 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 TCAF2P1-201ENST00000291129 2421 ntBASIC15.69■□□□□ 0.1
CTGFP29279 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
CTGFP29279 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.69■□□□□ 0.1
CTGFP29279 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.69■□□□□ 0.1
CTGFP29279 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CTGFP29279 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTGFP29279 POLR2LP1-206ENST00000444785 187 ntBASIC15.69■□□□□ 0.1
CTGFP29279 RPL29P2-201ENST00000488409 460 ntBASIC15.69■□□□□ 0.1
CTGFP29279 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTGFP29279 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.69■□□□□ 0.1
CTGFP29279 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms