Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.81□□□□□ -0.2
HTR1EP28566 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.81□□□□□ -0.2
HTR1EP28566 KRT18P8-201ENST00000581937 1246 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.81□□□□□ -0.2
HTR1EP28566 AC004466.1-201ENST00000599515 1080 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.81□□□□□ -0.2
HTR1EP28566 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 BX088702.1-201ENST00000610784 235 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 AC083964.2-201ENST00000623988 2396 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HTR1EP28566 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HTR1EP28566 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 BTBD6P1-201ENST00000412176 1267 ntBASIC13.8□□□□□ -0.2
HTR1EP28566 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.8□□□□□ -0.2
HTR1EP28566 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.8□□□□□ -0.2
HTR1EP28566 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.8□□□□□ -0.2
HTR1EP28566 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HTR1EP28566 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.8□□□□□ -0.2
HTR1EP28566 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
HTR1EP28566 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.8□□□□□ -0.2
HTR1EP28566 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HTR1EP28566 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HTR1EP28566 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.79□□□□□ -0.2
HTR1EP28566 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.79□□□□□ -0.2
HTR1EP28566 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms