Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
XPAP23025 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
XPAP23025 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 AC011498.7-201ENST00000624986 2027 ntBASIC14.51□□□□□ -0.09
XPAP23025 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
XPAP23025 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.51□□□□□ -0.09
XPAP23025 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.51□□□□□ -0.09
XPAP23025 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.51□□□□□ -0.09
XPAP23025 RN7SL530P-201ENST00000485097 298 ntBASIC14.51□□□□□ -0.09
XPAP23025 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
XPAP23025 NUP210P1-202ENST00000504322 710 ntBASIC14.51□□□□□ -0.09
XPAP23025 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.51□□□□□ -0.09
XPAP23025 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
XPAP23025 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
XPAP23025 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.51□□□□□ -0.09
XPAP23025 AC091812.3-201ENST00000621362 345 ntBASIC14.51□□□□□ -0.09
XPAP23025 AC068587.10-201ENST00000641210 219 ntBASIC14.51□□□□□ -0.09
XPAP23025 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.51□□□□□ -0.09
XPAP23025 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
XPAP23025 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
XPAP23025 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.51□□□□□ -0.09
XPAP23025 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
XPAP23025 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 AC073957.3-201ENST00000609998 6758 ntBASIC14.5□□□□□ -0.09
XPAP23025 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.5□□□□□ -0.09
XPAP23025 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.5□□□□□ -0.09
XPAP23025 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.5□□□□□ -0.09
XPAP23025 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.5□□□□□ -0.09
XPAP23025 AC090386.2-201ENST00000623010 1039 ntBASIC14.5□□□□□ -0.09
XPAP23025 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 AC099063.4-201ENST00000641099 1602 ntBASIC14.5□□□□□ -0.09
XPAP23025 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.5□□□□□ -0.09
XPAP23025 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
XPAP23025 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.5□□□□□ -0.09
XPAP23025 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms