Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CCL1P22362 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCL1P22362 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCL1P22362 AC018629.1-201ENST00000623381 1736 ntBASIC12.31□□□□□ -0.44
CCL1P22362 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 AP002353.1-201ENST00000528257 1599 ntBASIC12.31□□□□□ -0.44
CCL1P22362 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.31□□□□□ -0.44
CCL1P22362 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL1P22362 POM121L10P-201ENST00000436994 1285 ntBASIC12.31□□□□□ -0.44
CCL1P22362 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL1P22362 TUBB8P8-201ENST00000458717 1058 ntBASIC12.31□□□□□ -0.44
CCL1P22362 GOLGA2P8-201ENST00000505201 779 ntBASIC12.31□□□□□ -0.44
CCL1P22362 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL1P22362 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL1P22362 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 AC005324.6-201ENST00000587972 613 ntBASIC12.31□□□□□ -0.44
CCL1P22362 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 AL162274.1-201ENST00000617191 1098 ntBASIC12.31□□□□□ -0.44
CCL1P22362 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.31□□□□□ -0.44
CCL1P22362 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL1P22362 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL1P22362 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.31□□□□□ -0.44
CCL1P22362 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 LINC00115-201ENST00000473798 1317 ntBASIC12.31□□□□□ -0.44
CCL1P22362 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL1P22362 AC079781.5-202ENST00000641784 3743 ntBASIC12.31□□□□□ -0.44
CCL1P22362 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 AC027612.1-201ENST00000445234 2395 ntBASIC12.3□□□□□ -0.44
CCL1P22362 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 CICP8-201ENST00000455800 2813 ntBASIC12.3□□□□□ -0.44
CCL1P22362 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 LINC01165-201ENST00000445190 1623 ntBASIC12.3□□□□□ -0.44
CCL1P22362 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms