Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 AP000350.6-201ENST00000609510 5637 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
RAB4AP20338 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB4AP20338 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 TFAMP1-201ENST00000412727 736 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
RAB4AP20338 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 TARDBPP1-201ENST00000442013 1203 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 AL135744.1-201ENST00000565098 629 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB4AP20338 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
RAB4AP20338 AL049840.3-201ENST00000602669 611 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 AC116407.3-201ENST00000623905 1129 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
RAB4AP20338 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 AC073335.2-201ENST00000610177 3441 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 MKRN5P-201ENST00000445263 1467 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 AC027369.3-201ENST00000530465 3707 ntBASIC11.06□□□□□ -0.64
RAB4AP20338 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RAB4AP20338 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 AL845472.1-202ENST00000624675 4080 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 AGGF1P1-201ENST00000509500 2073 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC018665.1-201ENST00000622927 1362 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC015818.9-201ENST00000591705 4582 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB4AP20338 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 UPK3BP1-201ENST00000428678 509 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB4AP20338 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB4AP20338 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
RAB4AP20338 AC079776.4-201ENST00000511039 504 ntBASIC11.05□□□□□ -0.64
RAB4AP20338 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms