Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.75□□□□□ -0.05
ERCC2P18074 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ERCC2P18074 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ERCC2P18074 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ERCC2P18074 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ERCC2P18074 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ERCC2P18074 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 LINC00115-201ENST00000473798 1317 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.74□□□□□ -0.05
ERCC2P18074 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.74□□□□□ -0.05
ERCC2P18074 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ERCC2P18074 TSPY25P-201ENST00000429463 745 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.74□□□□□ -0.05
ERCC2P18074 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.74□□□□□ -0.05
ERCC2P18074 EIF4HP1-201ENST00000453115 687 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 ZNF767P-206ENST00000513792 565 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.74□□□□□ -0.05
ERCC2P18074 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
ERCC2P18074 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 AP001258.2-201ENST00000529891 490 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.74□□□□□ -0.05
ERCC2P18074 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.74□□□□□ -0.05
ERCC2P18074 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.74□□□□□ -0.05
ERCC2P18074 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.74□□□□□ -0.05
ERCC2P18074 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.74□□□□□ -0.05
ERCC2P18074 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ERCC2P18074 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.74□□□□□ -0.05
ERCC2P18074 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERCC2P18074 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.74□□□□□ -0.05
ERCC2P18074 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERCC2P18074 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.73□□□□□ -0.05
ERCC2P18074 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.73□□□□□ -0.05
ERCC2P18074 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ERCC2P18074 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.73□□□□□ -0.05
ERCC2P18074 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 RN7SKP214-201ENST00000364208 315 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 AC103592.1-201ENST00000394513 664 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 HMGA1P1-201ENST00000415560 1062 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 AC016700.1-201ENST00000429424 312 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.73□□□□□ -0.05
ERCC2P18074 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 AC091804.1-201ENST00000486888 567 ntBASIC14.73□□□□□ -0.05
ERCC2P18074 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERCC2P18074 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.73□□□□□ -0.05
ERCC2P18074 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms