Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LAMC1P11047 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.68■□□□□ 0.74
LAMC1P11047 AC023906.1-201ENST00000486386 453 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.68■□□□□ 0.74
LAMC1P11047 AC100858.1-201ENST00000514059 1228 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
LAMC1P11047 AL359219.1-201ENST00000556311 934 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 AC005777.1-201ENST00000588332 187 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 AC004686.1-201ENST00000605113 538 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.68■□□□□ 0.74
LAMC1P11047 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LAMC1P11047 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LAMC1P11047 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 LINC02228-204ENST00000642115 2962 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LAMC1P11047 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 CTSL-202ENST00000342020 933 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 BCRP4-201ENST00000506079 804 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 KNOP1P1-201ENST00000542108 989 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.67■□□□□ 0.74
LAMC1P11047 AL590235.1-201ENST00000564650 861 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 MIR4326-201ENST00000582203 59 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 AL160191.2-201ENST00000603975 601 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 AC126755.5-201ENST00000622756 267 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 AC020904.3-201ENST00000624199 442 ntBASIC19.67■□□□□ 0.74
LAMC1P11047 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.67■□□□□ 0.74
LAMC1P11047 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LAMC1P11047 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LAMC1P11047 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.67■□□□□ 0.74
LAMC1P11047 NRADDP-202ENST00000641269 1585 ntBASIC19.66■□□□□ 0.74
LAMC1P11047 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LAMC1P11047 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LAMC1P11047 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMC1P11047 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMC1P11047 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMC1P11047 IGHEP2-201ENST00000519308 1256 ntBASIC19.66■□□□□ 0.74
LAMC1P11047 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMC1P11047 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.66■□□□□ 0.74
LAMC1P11047 NAV1-210ENST00000593583 726 ntBASIC19.66■□□□□ 0.74
LAMC1P11047 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC19.66■□□□□ 0.74
LAMC1P11047 AC026120.2-201ENST00000617239 309 ntBASIC19.66■□□□□ 0.74
LAMC1P11047 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.66■□□□□ 0.74
LAMC1P11047 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
LAMC1P11047 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC19.66■□□□□ 0.74
LAMC1P11047 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LAMC1P11047 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 RNA5SP491-201ENST00000362936 118 ntBASIC19.65■□□□□ 0.74
LAMC1P11047 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC19.65■□□□□ 0.74
LAMC1P11047 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.65■□□□□ 0.74
LAMC1P11047 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC19.65■□□□□ 0.74
LAMC1P11047 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LAMC1P11047 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms