Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.85□□□□□ -0.35
APOA1P02647 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.85□□□□□ -0.35
APOA1P02647 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
APOA1P02647 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.85□□□□□ -0.35
APOA1P02647 AC007967.4-201ENST00000614700 386 ntBASIC12.85□□□□□ -0.35
APOA1P02647 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 AL691432.3-201ENST00000621860 400 ntBASIC12.85□□□□□ -0.35
APOA1P02647 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
APOA1P02647 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.85□□□□□ -0.35
APOA1P02647 AL845472.1-202ENST00000624675 4080 ntBASIC12.85□□□□□ -0.35
APOA1P02647 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOA1P02647 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
APOA1P02647 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
APOA1P02647 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 AL645937.2-201ENST00000396808 931 ntBASIC12.84□□□□□ -0.35
APOA1P02647 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.84□□□□□ -0.35
APOA1P02647 MTND6P24-201ENST00000440466 518 ntBASIC12.84□□□□□ -0.35
APOA1P02647 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.84□□□□□ -0.35
APOA1P02647 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.84□□□□□ -0.35
APOA1P02647 AL079307.3-201ENST00000556114 283 ntBASIC12.84□□□□□ -0.35
APOA1P02647 LINC01115-203ENST00000606068 577 ntBASIC12.84□□□□□ -0.35
APOA1P02647 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 AC003101.2-201ENST00000612557 442 ntBASIC12.84□□□□□ -0.35
APOA1P02647 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.84□□□□□ -0.35
APOA1P02647 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 AC093525.8-201ENST00000624099 1342 ntBASIC12.84□□□□□ -0.35
APOA1P02647 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 GHET1-201ENST00000627071 1906 ntBASIC12.84□□□□□ -0.35
APOA1P02647 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.84□□□□□ -0.35
APOA1P02647 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOA1P02647 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
APOA1P02647 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
APOA1P02647 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOA1P02647 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOA1P02647 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.83□□□□□ -0.35
APOA1P02647 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOA1P02647 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOA1P02647 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms