Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
KDELR3O43731 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.47□□□□□ -0.09
KDELR3O43731 AC005740.1-201ENST00000515639 522 ntBASIC14.47□□□□□ -0.09
KDELR3O43731 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.47□□□□□ -0.09
KDELR3O43731 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.47□□□□□ -0.09
KDELR3O43731 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.47□□□□□ -0.09
KDELR3O43731 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 AL928921.2-201ENST00000641325 2442 ntBASIC14.47□□□□□ -0.09
KDELR3O43731 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
KDELR3O43731 AL583805.1-201ENST00000391389 531 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 BX679664.3-201ENST00000414070 555 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 AP000358.1-201ENST00000456260 156 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 AC113935.1-201ENST00000471722 555 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 AC134698.3-201ENST00000523880 214 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 NDUFB10P1-201ENST00000567319 521 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 MIR3677-201ENST00000578964 60 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.46□□□□□ -0.09
KDELR3O43731 AL021707.6-201ENST00000609212 491 ntBASIC14.46□□□□□ -0.09
KDELR3O43731 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.46□□□□□ -0.09
KDELR3O43731 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.46□□□□□ -0.09
KDELR3O43731 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KDELR3O43731 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 MARK2P16-201ENST00000605714 1723 ntBASIC14.46□□□□□ -0.1
KDELR3O43731 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.46□□□□□ -0.1
KDELR3O43731 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.46□□□□□ -0.1
KDELR3O43731 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
KDELR3O43731 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.46□□□□□ -0.1
KDELR3O43731 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KDELR3O43731 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
KDELR3O43731 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.45□□□□□ -0.1
KDELR3O43731 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KDELR3O43731 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.45□□□□□ -0.1
KDELR3O43731 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KDELR3O43731 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.45□□□□□ -0.1
KDELR3O43731 MIR557-201ENST00000385239 98 ntBASIC14.45□□□□□ -0.1
KDELR3O43731 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KDELR3O43731 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms