Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AL354877.1-201ENST00000424412 413 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC012441.2-201ENST00000444843 739 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ACA64.2-201ENST00000459014 129 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC003686.1-201ENST00000550956 1034 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 AL160314.3-201ENST00000556041 767 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC009884.2-201ENST00000603110 324 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.56□□□□□ -0.56
SRRM4A7MD48 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SRRM4A7MD48 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SRRM4A7MD48 CCT8L1P-201ENST00000465400 1674 ntBASIC11.55□□□□□ -0.56
SRRM4A7MD48 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SRRM4A7MD48 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 AC073548.1-201ENST00000624088 1882 ntBASIC11.55□□□□□ -0.56
SRRM4A7MD48 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SRRM4A7MD48 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms