Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 KLF2P2-201ENST00000416807 1039 ntBASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AP001582.1-201ENST00000525856 295 ntBASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AC124283.3-201ENST00000570869 594 ntBASIC15.67■□□□□ 0.1
CCDC66A2RUB6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 RNA5SP421-201ENST00000516864 134 ntBASIC15.66■□□□□ 0.1
CCDC66A2RUB6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 AP000437.1-201ENST00000624057 2085 ntBASIC15.66■□□□□ 0.1
CCDC66A2RUB6 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC66A2RUB6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC003102.2-201ENST00000589195 1469 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 MYADML-201ENST00000474610 2147 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 INE2-201ENST00000630399 1874 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC015819.3-201ENST00000624305 2674 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 SLC7A15P-201ENST00000424028 1363 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms