Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CTBP2P3-201ENST00000585629 1255 ntBASIC12.39□□□□□ -0.43
NICN1Q9BSH3 AC009118.2-201ENST00000613275 655 ntBASIC12.39□□□□□ -0.43
NICN1Q9BSH3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NICN1Q9BSH3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 Z82170.1-201ENST00000625081 3192 ntBASIC12.38□□□□□ -0.43
NICN1Q9BSH3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 RN7SKP175-201ENST00000408472 289 ntBASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ARSEP1-201ENST00000420443 635 ntBASIC12.38□□□□□ -0.43
NICN1Q9BSH3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AL162726.2-201ENST00000438986 1017 ntBASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 AL391825.1-201ENST00000457671 1364 ntBASIC12.38□□□□□ -0.43
NICN1Q9BSH3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.38□□□□□ -0.43
NICN1Q9BSH3 OR2I1P-208ENST00000641137 4948 ntBASIC12.37□□□□□ -0.43
NICN1Q9BSH3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 AP000593.2-201ENST00000542775 1433 ntBASIC12.37□□□□□ -0.43
NICN1Q9BSH3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NICN1Q9BSH3 AC005586.2-201ENST00000563946 837 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms