Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 USP17L6P-201ENST00000382470 1197 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 BAATP1-201ENST00000412284 1225 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC004945.1-201ENST00000416738 983 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC012441.1-201ENST00000446669 685 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 CYMP-203ENST00000474680 1263 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AL033527.5-201ENST00000641382 801 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC090643.2-201ENST00000623442 2029 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CPNE2Q96FN4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
CPNE2Q96FN4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CPNE2Q96FN4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PIN1P1-201ENST00000412108 996 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 POM121L8P-201ENST00000417732 1281 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC098850.1-201ENST00000419919 790 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PMS2P2-201ENST00000425039 1128 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 POM121L9P-203ENST00000441984 1285 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AL355864.2-201ENST00000447420 863 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC011495.1-201ENST00000498085 584 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 KRT18P8-201ENST00000581937 1246 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC130686.1-201ENST00000622936 2466 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 AC134312.5-201ENST00000568031 1313 ntBASIC12.58□□□□□ -0.4
CPNE2Q96FN4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CPNE2Q96FN4 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CPNE2Q96FN4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CPNE2Q96FN4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CPNE2Q96FN4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms