Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM54Q969K7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 RCC2P1-201ENST00000452257 1476 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AC016700.1-201ENST00000429424 312 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 RN7SL530P-201ENST00000485097 298 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AL805961.1-203ENST00000641078 1258 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AL928654.5-201ENST00000624831 2501 ntBASIC12.6□□□□□ -0.39
TMEM54Q969K7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TMEM54Q969K7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM54Q969K7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AC061965.1-201ENST00000560524 1465 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 LINC02486-201ENST00000604157 3000 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 LINC01165-201ENST00000445190 1623 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AC243960.2-201ENST00000600996 747 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 NAP1L6-202ENST00000641404 1222 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 BRD7P5-201ENST00000299197 1822 ntBASIC12.59□□□□□ -0.39
TMEM54Q969K7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms