Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-CQ95604 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-CQ95604 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-CQ95604 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-CQ95604 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 C18orf15-201ENST00000623680 2534 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 MIR632-201ENST00000385193 94 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 U73169.1-201ENST00000395152 367 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 KRT8P6-201ENST00000399259 1207 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 SNORD88B-201ENST00000408454 91 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 POLR2LP1-206ENST00000444785 187 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 FAM86JP-202ENST00000484500 988 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 AC112250.1-201ENST00000504640 745 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 AC253576.1-201ENST00000511645 1156 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 COQ10BP2-201ENST00000513804 724 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.59□□□□□ -0.07
HLA-CQ95604 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-CQ95604 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-CQ95604 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 AL031673.1-201ENST00000611460 466 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 AC106782.5-201ENST00000616011 337 ntBASIC14.59□□□□□ -0.07
HLA-CQ95604 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-CQ95604 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-CQ95604 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-CQ95604 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-CQ95604 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
HLA-CQ95604 SALL4P6-201ENST00000429385 1691 ntBASIC14.58□□□□□ -0.07
HLA-CQ95604 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-CQ95604 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-CQ95604 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-CQ95604 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-CQ95604 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-CQ95604 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-CQ95604 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-CQ95604 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-CQ95604 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 KRT18P33-201ENST00000398525 1043 ntBASIC14.58□□□□□ -0.08
HLA-CQ95604 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-CQ95604 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-CQ95604 AC000077.1-201ENST00000420012 953 ntBASIC14.58□□□□□ -0.08
HLA-CQ95604 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-CQ95604 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-CQ95604 AC010086.2-201ENST00000428616 226 ntBASIC14.58□□□□□ -0.08
HLA-CQ95604 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-CQ95604 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-CQ95604 VDAC1P11-201ENST00000458323 852 ntBASIC14.58□□□□□ -0.08
HLA-CQ95604 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-CQ95604 AC010202.1-201ENST00000551181 405 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms