Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 PDLIM1P1-201ENST00000604187 969 ntBASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 DUX4L33-201ENST00000635217 958 ntBASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALMS1Q8TCU4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AL121994.1-201ENST00000413189 402 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AL022313.4-201ENST00000562756 2046 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 BX640514.1-201ENST00000583223 1918 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AL121949.1-201ENST00000402043 968 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 EEF1GP2-201ENST00000509352 1243 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AC137723.2-201ENST00000623540 398 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 RNA5SP84-201ENST00000364740 107 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 RPSAP16-201ENST00000447583 821 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 HAX1-211ENST00000532105 771 ntTSL 3 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 ALOX12P1-201ENST00000579299 1229 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 MIR7704-201ENST00000610524 59 ntBASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALMS1Q8TCU4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 SOD1-202ENST00000389995 865 ntTSL 3 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 RPL35P1-201ENST00000450819 370 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC089987.1-201ENST00000551654 2209 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 USP17L6P-201ENST00000382470 1197 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 NRADDP-202ENST00000641269 1585 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 HYMAI-201ENST00000635591 3347 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms