Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 PPT1-213ENST00000641319 2388 ntBASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLHC1Q8NHS4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 CNN2P8-201ENST00000421872 913 ntBASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AL596325.1-201ENST00000563991 1082 ntBASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 PPY2P-201ENST00000582808 702 ntBASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC104506.1-201ENST00000609247 429 ntBASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 AC005562.1-201ENST00000583030 3219 ntBASIC13.85□□□□□ -0.19
CLHC1Q8NHS4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 AL136309.1-201ENST00000403917 691 ntBASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 AL035414.1-201ENST00000451327 857 ntBASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.84□□□□□ -0.19
CLHC1Q8NHS4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms