Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AL109809.1-201ENST00000418979 1367 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AC023824.1-201ENST00000562945 2975 ntBASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS4Q8IUM7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 AC090505.1-201ENST00000430515 1834 ntBASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 AC073210.1-201ENST00000414799 232 ntBASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 AC026470.1-201ENST00000478038 846 ntBASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 AC006548.2-201ENST00000605217 529 ntBASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 AC244517.3-201ENST00000616254 1235 ntBASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS4Q8IUM7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AL365181.1-201ENST00000564032 1828 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 USP17L6P-201ENST00000382470 1197 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 KRT18P4-201ENST00000422599 1288 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 DDX39AP1-201ENST00000445147 1181 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 VENTXP4-201ENST00000449029 958 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 COQ10BP2-201ENST00000513804 724 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AL022313.4-201ENST00000562756 2046 ntBASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
NPAS4Q8IUM7 AC117503.4-201ENST00000623229 1418 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms