Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 TPT1P11-201ENST00000458482 498 ntBASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC103810.10-201ENST00000606504 343 ntBASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC009560.1-201ENST00000620208 434 ntBASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC064801.2-201ENST00000625052 1303 ntBASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
H3F3CQ6NXT2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AL390755.1-201ENST00000623716 2027 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 MTHFR-210ENST00000641407 2387 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 MIR557-201ENST00000385239 98 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AP000358.1-201ENST00000456260 156 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AC130709.1-201ENST00000484779 1212 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SIGLEC18P-201ENST00000602271 909 ntBASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms