Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 PCDHB19P-202ENST00000625133 2914 ntBASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AC073869.1-201ENST00000415574 2762 ntBASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 KLF2P2-201ENST00000416807 1039 ntBASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 FO681548.1-201ENST00000455617 1132 ntBASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 AC115284.2-201ENST00000624646 2054 ntBASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AP003969.2-201ENST00000623739 2275 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AC060814.4-201ENST00000594169 2163 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AL161932.2-201ENST00000435436 679 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 BCRP1-201ENST00000444246 691 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AC104506.1-201ENST00000609247 429 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 AC007431.3-201ENST00000623221 587 ntBASIC11.97□□□□□ -0.49
ANKRD55Q3KP44 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms