Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC023824.1-201ENST00000562945 2975 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 KRT8P6-201ENST00000399259 1207 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC022447.5-201ENST00000504817 392 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CCNL2P1-201ENST00000512846 969 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 KLF17P1-201ENST00000547105 1126 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC021321.1-201ENST00000607397 1113 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 Z82244.2-201ENST00000632196 448 ntBASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 PPP1R2P4-201ENST00000424051 595 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RNASEH2CP1-201ENST00000454281 502 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AC007679.1-201ENST00000458609 502 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RN7SL351P-201ENST00000469306 248 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RPSAP70-201ENST00000504462 864 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 TPST2P1-201ENST00000564073 1102 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RN7SL478P-201ENST00000584358 298 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AL136982.5-201ENST00000605222 294 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 BX322534.1-201ENST00000635574 241 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AC215524.1-201ENST00000635696 241 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms