Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP1Q04837 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 LINC02486-201ENST00000604157 3000 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AC020917.4-201ENST00000623994 1999 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SSBP1Q04837 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP1Q04837 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 ACKR1-201ENST00000368121 1240 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AL442647.2-201ENST00000429864 857 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AC009477.1-201ENST00000452936 217 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 AL589987.1-201ENST00000453380 819 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP1Q04837 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.16□□□□□ -0.46
SSBP1Q04837 AL390955.2-201ENST00000603032 514 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 AC138466.3-201ENST00000619983 221 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 AP000593.2-201ENST00000542775 1433 ntBASIC12.16□□□□□ -0.46
SSBP1Q04837 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSBP1Q04837 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SSBP1Q04837 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP1Q04837 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP1Q04837 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SSBP1Q04837 FKBP4P6-201ENST00000457486 1332 ntBASIC12.15□□□□□ -0.46
SSBP1Q04837 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
SSBP1Q04837 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.15□□□□□ -0.46
SSBP1Q04837 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 AC020910.5-201ENST00000623668 1865 ntBASIC12.15□□□□□ -0.46
SSBP1Q04837 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP1Q04837 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.15□□□□□ -0.46
SSBP1Q04837 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SSBP1Q04837 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 MIR940-201ENST00000401276 94 ntBASIC12.15□□□□□ -0.46
SSBP1Q04837 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSBP1Q04837 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.15□□□□□ -0.46
SSBP1Q04837 SOCS2P1-201ENST00000417727 557 ntBASIC12.15□□□□□ -0.46
SSBP1Q04837 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.15□□□□□ -0.46
SSBP1Q04837 AC011495.1-201ENST00000498085 584 ntBASIC12.15□□□□□ -0.46
SSBP1Q04837 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.15□□□□□ -0.46
SSBP1Q04837 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
SSBP1Q04837 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
SSBP1Q04837 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms