Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 AC020658.7-201ENST00000624274 2442 ntBASIC13.58□□□□□ -0.24
RAE1P78406 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 AC079781.5-202ENST00000641784 3743 ntBASIC13.57□□□□□ -0.24
RAE1P78406 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 LINC01815-202ENST00000641468 1409 ntBASIC13.57□□□□□ -0.24
RAE1P78406 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAE1P78406 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAE1P78406 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RAE1P78406 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAE1P78406 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAE1P78406 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.57□□□□□ -0.24
RAE1P78406 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.57□□□□□ -0.24
RAE1P78406 AC104073.2-201ENST00000453737 312 ntBASIC13.57□□□□□ -0.24
RAE1P78406 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 SNORD3B-2-202ENST00000571722 791 ntBASIC13.57□□□□□ -0.24
RAE1P78406 AC005695.3-201ENST00000614522 232 ntBASIC13.57□□□□□ -0.24
RAE1P78406 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
RAE1P78406 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RAE1P78406 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 AC067750.1-201ENST00000608826 6545 ntBASIC13.57□□□□□ -0.24
RAE1P78406 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAE1P78406 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RAE1P78406 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.57□□□□□ -0.24
RAE1P78406 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAE1P78406 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 AC061965.1-201ENST00000560524 1465 ntBASIC13.56□□□□□ -0.24
RAE1P78406 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.56□□□□□ -0.24
RAE1P78406 AC005014.1-201ENST00000432006 2976 ntBASIC13.56□□□□□ -0.24
RAE1P78406 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 POM121L10P-201ENST00000436994 1285 ntBASIC13.56□□□□□ -0.24
RAE1P78406 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.56□□□□□ -0.24
RAE1P78406 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.56□□□□□ -0.24
RAE1P78406 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
RAE1P78406 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.56□□□□□ -0.24
RAE1P78406 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.56□□□□□ -0.24
RAE1P78406 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms