Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GABREP78334 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABREP78334 AGGF1P1-201ENST00000509500 2073 ntBASIC13.62□□□□□ -0.23
GABREP78334 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GABREP78334 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABREP78334 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABREP78334 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABREP78334 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.62□□□□□ -0.23
GABREP78334 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 AL591122.2-201ENST00000624125 1853 ntBASIC13.61□□□□□ -0.23
GABREP78334 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 ACTG1P19-201ENST00000418987 1116 ntBASIC13.61□□□□□ -0.23
GABREP78334 SCARNA12-201ENST00000459155 270 ntBASIC13.61□□□□□ -0.23
GABREP78334 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.61□□□□□ -0.23
GABREP78334 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.61□□□□□ -0.23
GABREP78334 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.61□□□□□ -0.23
GABREP78334 AP005212.2-201ENST00000584979 510 ntBASIC13.61□□□□□ -0.23
GABREP78334 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.61□□□□□ -0.23
GABREP78334 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.61□□□□□ -0.23
GABREP78334 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
GABREP78334 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.61□□□□□ -0.23
GABREP78334 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 AC015688.4-201ENST00000580780 1647 ntBASIC13.61□□□□□ -0.23
GABREP78334 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GABREP78334 KHSRPP1-201ENST00000427983 1768 ntBASIC13.6□□□□□ -0.23
GABREP78334 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GABREP78334 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GABREP78334 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.6□□□□□ -0.23
GABREP78334 AC244197.1-201ENST00000456494 951 ntBASIC13.6□□□□□ -0.23
GABREP78334 RN7SL494P-201ENST00000461517 304 ntBASIC13.6□□□□□ -0.23
GABREP78334 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.6□□□□□ -0.23
GABREP78334 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.6□□□□□ -0.23
GABREP78334 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms