Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 AC020907.1-201ENST00000616460 1350 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 MIR1247-201ENST00000408206 136 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN20P56880 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 AC004898.1-201ENST00000451057 766 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 AL035414.1-201ENST00000451327 857 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN20P56880 AC126915.1-201ENST00000522847 1038 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 AP001258.2-201ENST00000529891 490 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDN20P56880 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 AC103988.2-201ENST00000561804 725 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 MIR6720-201ENST00000611664 98 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 AL023803.2-201ENST00000620080 638 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLDN20P56880 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 AC019294.4-201ENST00000561777 2905 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 AL590440.2-201ENST00000641973 1595 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 AC073548.1-201ENST00000624088 1882 ntBASIC13.23□□□□□ -0.29
CLDN20P56880 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN20P56880 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN20P56880 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN20P56880 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN20P56880 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 CES1P1-201ENST00000421606 1704 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN20P56880 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CLDN20P56880 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 GPAA1P2-201ENST00000417923 928 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN20P56880 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN20P56880 SERPINA13P-202ENST00000478994 924 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms