Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 AP000356.3-201ENST00000382243 753 ntBASIC15.43■□□□□ 0.06
VCPP55072 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 TLE1P1-201ENST00000422965 589 ntBASIC15.43■□□□□ 0.06
VCPP55072 AL139008.1-201ENST00000437894 228 ntBASIC15.43■□□□□ 0.06
VCPP55072 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.43■□□□□ 0.06
VCPP55072 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.43■□□□□ 0.06
VCPP55072 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.43■□□□□ 0.06
VCPP55072 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.43■□□□□ 0.06
VCPP55072 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.43■□□□□ 0.06
VCPP55072 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.43■□□□□ 0.06
VCPP55072 DGAT2L7P-201ENST00000602462 744 ntBASIC15.43■□□□□ 0.06
VCPP55072 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 AC002472.3-201ENST00000640124 621 ntBASIC15.43■□□□□ 0.06
VCPP55072 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 SALL4P5-201ENST00000419001 1760 ntBASIC15.43■□□□□ 0.06
VCPP55072 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.43■□□□□ 0.06
VCPP55072 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.43■□□□□ 0.06
VCPP55072 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCPP55072 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VCPP55072 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
VCPP55072 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VCPP55072 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VCPP55072 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 AC003102.2-201ENST00000589195 1469 ntBASIC15.42■□□□□ 0.06
VCPP55072 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.42■□□□□ 0.06
VCPP55072 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
VCPP55072 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.42■□□□□ 0.06
VCPP55072 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.42■□□□□ 0.06
VCPP55072 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.42■□□□□ 0.06
VCPP55072 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.42■□□□□ 0.06
VCPP55072 AC138466.4-201ENST00000623965 852 ntBASIC15.42■□□□□ 0.06
VCPP55072 NAP1L6-202ENST00000641404 1222 ntBASIC15.42■□□□□ 0.06
VCPP55072 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VCPP55072 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.42■□□□□ 0.06
VCPP55072 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.42■□□□□ 0.06
VCPP55072 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VCPP55072 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VCPP55072 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
VCPP55072 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.41■□□□□ 0.06
VCPP55072 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.41■□□□□ 0.06
VCPP55072 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VCPP55072 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VCPP55072 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
VCPP55072 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.41■□□□□ 0.06
VCPP55072 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.41■□□□□ 0.06
VCPP55072 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VCPP55072 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms