Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CSNK1EP49674 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 BX679664.3-201ENST00000414070 555 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 PPP1R2P4-201ENST00000424051 595 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.98□□□□□ -0.17
CSNK1EP49674 AC113935.1-201ENST00000471722 555 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 RN7SL375P-201ENST00000492442 298 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AC093826.1-201ENST00000508655 993 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.98□□□□□ -0.17
CSNK1EP49674 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 DNM1P51-201ENST00000558149 522 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.98□□□□□ -0.17
CSNK1EP49674 AC055811.3-201ENST00000584952 686 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AP005264.5-201ENST00000590066 467 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AC012073.1-201ENST00000606114 1108 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AC104506.1-201ENST00000609247 429 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AL359091.4-201ENST00000610052 409 ntBASIC13.98□□□□□ -0.17
CSNK1EP49674 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.98□□□□□ -0.17
CSNK1EP49674 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
CSNK1EP49674 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CSNK1EP49674 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1EP49674 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1EP49674 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 AC023157.3-201ENST00000619086 2088 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 AC064801.2-201ENST00000625052 1303 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 RN7SL788P-201ENST00000460504 316 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 RN7SL494P-201ENST00000461517 304 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1EP49674 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.97□□□□□ -0.17
CSNK1EP49674 SNORD3B-1-201ENST00000577988 758 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.97□□□□□ -0.17
CSNK1EP49674 AC010976.2-201ENST00000609697 852 ntBASIC13.97□□□□□ -0.17
CSNK1EP49674 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CSNK1EP49674 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.97□□□□□ -0.17
CSNK1EP49674 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSNK1EP49674 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSNK1EP49674 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms