Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NRADDP-202ENST00000641269 1585 ntBASIC18.89■□□□□ 0.61
USP6P35125 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USP6P35125 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 AC104961.1-201ENST00000427605 771 ntBASIC18.89■□□□□ 0.61
USP6P35125 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.89■□□□□ 0.61
USP6P35125 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
USP6P35125 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6P35125 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 DGAT2L7P-201ENST00000602462 744 ntBASIC18.89■□□□□ 0.61
USP6P35125 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.89■□□□□ 0.61
USP6P35125 AC113385.2-201ENST00000614465 762 ntBASIC18.89■□□□□ 0.61
USP6P35125 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC18.89■□□□□ 0.61
USP6P35125 AC139713.2-207ENST00000641556 1292 ntBASIC18.89■□□□□ 0.61
USP6P35125 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6P35125 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 AC008620.2-201ENST00000510294 1569 ntBASIC18.88■□□□□ 0.61
USP6P35125 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6P35125 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
USP6P35125 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
USP6P35125 SIRPB3P-201ENST00000340424 1216 ntBASIC18.88■□□□□ 0.61
USP6P35125 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6P35125 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.88■□□□□ 0.61
USP6P35125 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6P35125 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6P35125 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.88■□□□□ 0.61
USP6P35125 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
USP6P35125 NAV1-210ENST00000593583 726 ntBASIC18.88■□□□□ 0.61
USP6P35125 GGNBP1-204ENST00000613113 887 ntBASIC18.88■□□□□ 0.61
USP6P35125 AL627230.2-201ENST00000613254 655 ntBASIC18.88■□□□□ 0.61
USP6P35125 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.88■□□□□ 0.61
USP6P35125 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.88■□□□□ 0.61
USP6P35125 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP6P35125 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.88■□□□□ 0.61
USP6P35125 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 DBET-201ENST00000630918 3363 ntBASIC18.87■□□□□ 0.61
USP6P35125 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
USP6P35125 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.87■□□□□ 0.61
USP6P35125 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
USP6P35125 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP6P35125 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
USP6P35125 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.87■□□□□ 0.61
USP6P35125 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 RNA5SP491-201ENST00000362936 118 ntBASIC18.87■□□□□ 0.61
USP6P35125 HLA-DMA-202ENST00000395303 1007 ntBASIC18.87■□□□□ 0.61
USP6P35125 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.87■□□□□ 0.61
USP6P35125 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.87■□□□□ 0.61
USP6P35125 AC025594.1-201ENST00000469533 543 ntBASIC18.87■□□□□ 0.61
USP6P35125 MIR5001-201ENST00000580185 100 ntBASIC18.87■□□□□ 0.61
USP6P35125 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.87■□□□□ 0.61
USP6P35125 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
USP6P35125 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
USP6P35125 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 CICP16-201ENST00000502609 2813 ntBASIC18.87■□□□□ 0.61
USP6P35125 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP6P35125 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.86■□□□□ 0.61
USP6P35125 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.86■□□□□ 0.61
USP6P35125 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USP6P35125 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 AC103563.1-201ENST00000429316 123 ntBASIC18.86■□□□□ 0.61
USP6P35125 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.86■□□□□ 0.61
USP6P35125 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms