Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PGK1P2-201ENST00000431702 1214 ntBASIC19.61■□□□□ 0.73
CPS1P31327 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC19.61■□□□□ 0.73
CPS1P31327 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPS1P31327 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CPS1P31327 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPS1P31327 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CPS1P31327 AL022313.4-201ENST00000562756 2046 ntBASIC19.6■□□□□ 0.73
CPS1P31327 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.6■□□□□ 0.73
CPS1P31327 PES1P2-201ENST00000449745 1735 ntBASIC19.6■□□□□ 0.73
CPS1P31327 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.6■□□□□ 0.73
CPS1P31327 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.6■□□□□ 0.73
CPS1P31327 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.6■□□□□ 0.73
CPS1P31327 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.6■□□□□ 0.73
CPS1P31327 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CPS1P31327 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.6■□□□□ 0.73
CPS1P31327 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPS1P31327 MIR181D-201ENST00000384853 137 ntBASIC19.6■□□□□ 0.73
CPS1P31327 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CPS1P31327 PPP1R2P10-201ENST00000393023 595 ntBASIC19.6■□□□□ 0.73
CPS1P31327 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC19.6■□□□□ 0.73
CPS1P31327 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC19.6■□□□□ 0.73
CPS1P31327 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC19.6■□□□□ 0.73
CPS1P31327 HNRNPA1P59-201ENST00000430583 918 ntBASIC19.6■□□□□ 0.73
CPS1P31327 RNA5SP420-201ENST00000516997 137 ntBASIC19.6■□□□□ 0.73
CPS1P31327 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.6■□□□□ 0.73
CPS1P31327 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC19.6■□□□□ 0.73
CPS1P31327 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC19.6■□□□□ 0.73
CPS1P31327 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.6■□□□□ 0.73
CPS1P31327 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC19.6■□□□□ 0.73
CPS1P31327 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.59■□□□□ 0.73
CPS1P31327 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.59■□□□□ 0.73
CPS1P31327 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.59■□□□□ 0.73
CPS1P31327 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 TUBB8P4-201ENST00000511806 1324 ntBASIC19.59■□□□□ 0.73
CPS1P31327 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 MPV17-209ENST00000405983 859 ntTSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 IQCF4-203ENST00000428561 420 ntBASIC19.59■□□□□ 0.73
CPS1P31327 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CPS1P31327 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC19.59■□□□□ 0.73
CPS1P31327 AL450346.2-201ENST00000495602 1024 ntBASIC19.59■□□□□ 0.73
CPS1P31327 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC19.59■□□□□ 0.73
CPS1P31327 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC19.59■□□□□ 0.73
CPS1P31327 AC091691.1-201ENST00000583587 1018 ntBASIC19.59■□□□□ 0.73
CPS1P31327 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC19.59■□□□□ 0.73
CPS1P31327 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC19.59■□□□□ 0.73
CPS1P31327 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CPS1P31327 CICP14-201ENST00000629111 2732 ntBASIC19.59■□□□□ 0.73
CPS1P31327 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPS1P31327 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.58■□□□□ 0.73
CPS1P31327 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.58■□□□□ 0.73
CPS1P31327 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 AL591499.1-201ENST00000307155 1153 ntBASIC19.58■□□□□ 0.73
CPS1P31327 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC19.58■□□□□ 0.73
CPS1P31327 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC19.58■□□□□ 0.73
CPS1P31327 AL627095.1-201ENST00000414775 321 ntBASIC19.58■□□□□ 0.73
CPS1P31327 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CPS1P31327 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CPS1P31327 AL139317.2-201ENST00000556998 158 ntBASIC19.58■□□□□ 0.73
CPS1P31327 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPS1P31327 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CPS1P31327 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms