Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VARSP26640 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VARSP26640 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.27□□□□□ -0.12
VARSP26640 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.27□□□□□ -0.12
VARSP26640 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VARSP26640 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.27□□□□□ -0.12
VARSP26640 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 AC011700.1-201ENST00000610409 2627 ntBASIC14.27□□□□□ -0.13
VARSP26640 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.27□□□□□ -0.13
VARSP26640 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 CD8B2-202ENST00000417670 633 ntBASIC14.27□□□□□ -0.13
VARSP26640 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 AL603841.1-201ENST00000430516 664 ntBASIC14.27□□□□□ -0.13
VARSP26640 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.27□□□□□ -0.13
VARSP26640 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.27□□□□□ -0.13
VARSP26640 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.27□□□□□ -0.13
VARSP26640 AL391001.1-201ENST00000602747 715 ntBASIC14.27□□□□□ -0.13
VARSP26640 AC073413.1-201ENST00000603927 732 ntBASIC14.27□□□□□ -0.13
VARSP26640 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.27□□□□□ -0.13
VARSP26640 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.27□□□□□ -0.13
VARSP26640 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 MYADML-201ENST00000474610 2147 ntBASIC14.27□□□□□ -0.13
VARSP26640 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.27□□□□□ -0.13
VARSP26640 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.27□□□□□ -0.13
VARSP26640 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VARSP26640 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VARSP26640 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
VARSP26640 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VARSP26640 RN7SL713P-201ENST00000582127 302 ntBASIC14.26□□□□□ -0.13
VARSP26640 RN7SL190P-201ENST00000582519 257 ntBASIC14.26□□□□□ -0.13
VARSP26640 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.26□□□□□ -0.13
VARSP26640 AP001002.3-201ENST00000623482 206 ntBASIC14.26□□□□□ -0.13
VARSP26640 AC002472.3-201ENST00000640124 621 ntBASIC14.26□□□□□ -0.13
VARSP26640 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.26□□□□□ -0.13
VARSP26640 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms