Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 LAP3P2-201ENST00000454686 1454 ntBASIC14.53□□□□□ -0.08
XPAP23025 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.53□□□□□ -0.08
XPAP23025 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 REXO1L1P-201ENST00000379010 6598 ntBASIC14.53□□□□□ -0.08
XPAP23025 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 AL161932.2-201ENST00000435436 679 ntBASIC14.53□□□□□ -0.08
XPAP23025 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.53□□□□□ -0.08
XPAP23025 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
XPAP23025 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.53□□□□□ -0.08
XPAP23025 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 MIR3188-201ENST00000583494 85 ntBASIC14.53□□□□□ -0.08
XPAP23025 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
XPAP23025 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
XPAP23025 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
XPAP23025 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.52□□□□□ -0.08
XPAP23025 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
XPAP23025 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.52□□□□□ -0.08
XPAP23025 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
XPAP23025 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.52□□□□□ -0.08
XPAP23025 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
XPAP23025 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 AC064801.2-201ENST00000625052 1303 ntBASIC14.52□□□□□ -0.08
XPAP23025 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
XPAP23025 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 AL596276.2-201ENST00000447525 331 ntBASIC14.52□□□□□ -0.09
XPAP23025 AL353637.1-201ENST00000451571 732 ntBASIC14.52□□□□□ -0.09
XPAP23025 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.52□□□□□ -0.09
XPAP23025 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.52□□□□□ -0.09
XPAP23025 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.52□□□□□ -0.09
XPAP23025 MIR3619-201ENST00000579667 83 ntBASIC14.52□□□□□ -0.09
XPAP23025 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.52□□□□□ -0.09
XPAP23025 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
XPAP23025 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 RN7SL832P-201ENST00000607781 1756 ntBASIC14.52□□□□□ -0.09
XPAP23025 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
XPAP23025 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms