Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF3P18847 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF3P18847 AL121753.2-201ENST00000624581 1461 ntBASIC19.28■□□□□ 0.68
ATF3P18847 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.28■□□□□ 0.68
ATF3P18847 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 EML1-203ENST00000334192 4064 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 FTH1P18-201ENST00000412071 549 ntBASIC19.28■□□□□ 0.68
ATF3P18847 OR7E155P-201ENST00000412208 1014 ntBASIC19.28■□□□□ 0.68
ATF3P18847 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC19.28■□□□□ 0.68
ATF3P18847 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 AC104212.2-201ENST00000478813 628 ntBASIC19.28■□□□□ 0.68
ATF3P18847 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC19.28■□□□□ 0.68
ATF3P18847 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 AC010202.1-201ENST00000551181 405 ntBASIC19.28■□□□□ 0.68
ATF3P18847 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC19.28■□□□□ 0.68
ATF3P18847 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 CLPP-205ENST00000596605 646 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 NF1P11-201ENST00000621292 1282 ntBASIC19.28■□□□□ 0.68
ATF3P18847 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF3P18847 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATF3P18847 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF3P18847 AC008620.2-201ENST00000510294 1569 ntBASIC19.27■□□□□ 0.68
ATF3P18847 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
ATF3P18847 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 FER1L4-210ENST00000615531 5998 ntBASIC19.27■□□□□ 0.68
ATF3P18847 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF3P18847 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 U73169.1-201ENST00000395152 367 ntBASIC19.27■□□□□ 0.68
ATF3P18847 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF3P18847 PHBP10-201ENST00000416467 784 ntBASIC19.27■□□□□ 0.68
ATF3P18847 AC053503.3-201ENST00000448375 114 ntBASIC19.27■□□□□ 0.68
ATF3P18847 AC007679.1-201ENST00000458609 502 ntBASIC19.27■□□□□ 0.68
ATF3P18847 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF3P18847 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF3P18847 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 AP003040.1-201ENST00000532044 1024 ntBASIC19.27■□□□□ 0.68
ATF3P18847 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC19.27■□□□□ 0.68
ATF3P18847 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF3P18847 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF3P18847 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF3P18847 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 PRORSD1P-202ENST00000563365 2154 ntBASIC19.27■□□□□ 0.68
ATF3P18847 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF3P18847 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF3P18847 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATF3P18847 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATF3P18847 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATF3P18847 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 HNRNPA3P12-201ENST00000437410 1063 ntBASIC19.26■□□□□ 0.67
ATF3P18847 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms