Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DOBP13765 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
HLA-DOBP13765 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DOBP13765 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 VDAC1P1-201ENST00000439229 848 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 AL591846.1-201ENST00000451736 433 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC005324.6-201ENST00000587972 613 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC021016.3-201ENST00000608367 477 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC005695.3-201ENST00000614522 232 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC133540.1-201ENST00000620845 1019 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 KRT8P29-201ENST00000420409 1371 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC130686.1-201ENST00000622936 2466 ntBASIC12.89□□□□□ -0.35
HLA-DOBP13765 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DOBP13765 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DOBP13765 AC023794.5-201ENST00000564380 2157 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC018735.1-201ENST00000437208 1502 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC004899.1-201ENST00000424687 1714 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 USP17L6P-201ENST00000382470 1197 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 KRT18P36-201ENST00000411618 1276 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TUBB8P8-201ENST00000458717 1058 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms