Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CD48P09326 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD48P09326 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD48P09326 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.86□□□□□ -0.03
CD48P09326 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 XBP1P1-201ENST00000436573 652 ntBASIC14.86□□□□□ -0.03
CD48P09326 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.86□□□□□ -0.03
CD48P09326 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.86□□□□□ -0.03
CD48P09326 AC239800.4-201ENST00000603712 296 ntBASIC14.86□□□□□ -0.03
CD48P09326 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.86□□□□□ -0.03
CD48P09326 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CD48P09326 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD48P09326 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD48P09326 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 AC067750.1-201ENST00000608826 6545 ntBASIC14.85□□□□□ -0.03
CD48P09326 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD48P09326 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 AC104073.2-201ENST00000453737 312 ntBASIC14.85□□□□□ -0.03
CD48P09326 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.85□□□□□ -0.03
CD48P09326 AL512310.5-201ENST00000551999 515 ntBASIC14.85□□□□□ -0.03
CD48P09326 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.85□□□□□ -0.03
CD48P09326 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms