Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
COL5A2P05997 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 HSD3BP1-201ENST00000286193 1111 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 AC000077.1-201ENST00000420012 953 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 HNRNPA1P25-201ENST00000422644 937 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC18.27■□□□□ 0.52
COL5A2P05997 AC108724.1-201ENST00000481669 352 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC18.27■□□□□ 0.52
COL5A2P05997 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.27■□□□□ 0.52
COL5A2P05997 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC18.27■□□□□ 0.52
COL5A2P05997 RN7SL440P-201ENST00000577855 343 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.27■□□□□ 0.52
COL5A2P05997 AC006986.1-201ENST00000612764 241 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC18.27■□□□□ 0.52
COL5A2P05997 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC18.27■□□□□ 0.52
COL5A2P05997 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.27■□□□□ 0.52
COL5A2P05997 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.27■□□□□ 0.52
COL5A2P05997 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.27■□□□□ 0.52
COL5A2P05997 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL5A2P05997 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC18.27■□□□□ 0.51
COL5A2P05997 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
COL5A2P05997 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
COL5A2P05997 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL5A2P05997 KRT8P42-201ENST00000405771 1399 ntBASIC18.27■□□□□ 0.51
COL5A2P05997 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
COL5A2P05997 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
COL5A2P05997 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL5A2P05997 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
COL5A2P05997 AC132872.4-202ENST00000622924 2756 ntBASIC18.27■□□□□ 0.51
COL5A2P05997 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.26■□□□□ 0.51
COL5A2P05997 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC026412.1-206ENST00000502273 206 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.26■□□□□ 0.51
COL5A2P05997 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC18.26■□□□□ 0.51
COL5A2P05997 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COL5A2P05997 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC007279.1-201ENST00000448547 837 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 PEBP1P3-201ENST00000455475 548 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 IGKV1OR-2-201ENST00000457995 350 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 B9D1-206ENST00000461069 923 ntTSL 2 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.26■□□□□ 0.51
COL5A2P05997 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC023051.2-201ENST00000541141 460 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC023824.1-201ENST00000562945 2975 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC18.26■□□□□ 0.51
COL5A2P05997 AC106782.5-201ENST00000616011 337 ntBASIC18.26■□□□□ 0.51
COL5A2P05997 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC18.26■□□□□ 0.51
COL5A2P05997 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL5A2P05997 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL5A2P05997 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 AC093462.1-201ENST00000621167 1683 ntBASIC18.25■□□□□ 0.51
COL5A2P05997 GUCY2EP-203ENST00000531117 1918 ntBASIC18.25■□□□□ 0.51
COL5A2P05997 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL5A2P05997 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms