Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR3DP05423 BANF1P3-201ENST00000412556 261 ntBASIC17.17■□□□□ 0.34
POLR3DP05423 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 RPL8P2-201ENST00000430538 502 ntBASIC17.17■□□□□ 0.34
POLR3DP05423 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.17■□□□□ 0.34
POLR3DP05423 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 DUX4L50-201ENST00000455245 715 ntBASIC17.17■□□□□ 0.34
POLR3DP05423 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR3DP05423 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR3DP05423 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 AC005840.4-201ENST00000541242 2494 ntBASIC17.17■□□□□ 0.34
POLR3DP05423 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.17■□□□□ 0.34
POLR3DP05423 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.17■□□□□ 0.34
POLR3DP05423 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.17■□□□□ 0.34
POLR3DP05423 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
POLR3DP05423 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.17■□□□□ 0.34
POLR3DP05423 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR3DP05423 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR3DP05423 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 CAP2P1-201ENST00000557743 1390 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.16■□□□□ 0.34
POLR3DP05423 AL627231.1-201ENST00000394467 1125 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.16■□□□□ 0.34
POLR3DP05423 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 FTLP1-201ENST00000449155 526 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.16■□□□□ 0.34
POLR3DP05423 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 PHBP15-201ENST00000574228 665 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.16■□□□□ 0.34
POLR3DP05423 AL022334.2-201ENST00000610000 484 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
POLR3DP05423 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 AC152010.1-201ENST00000415779 2006 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
POLR3DP05423 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR3DP05423 KRT18P9-201ENST00000604826 1300 ntBASIC17.16■□□□□ 0.34
POLR3DP05423 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.16■□□□□ 0.34
POLR3DP05423 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR3DP05423 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 AC012617.1-204ENST00000586340 2305 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
POLR3DP05423 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
POLR3DP05423 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR3DP05423 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 AC092580.1-201ENST00000433998 658 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 AL161932.2-201ENST00000435436 679 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms