Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AKR7A2P1-201ENST00000460134 915 ntBASIC15.41■□□□□ 0.06
HLA-DRAP01903 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 MIR3188-201ENST00000583494 85 ntBASIC15.41■□□□□ 0.06
HLA-DRAP01903 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 NAP1L6-202ENST00000641404 1222 ntBASIC15.41■□□□□ 0.06
HLA-DRAP01903 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRAP01903 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.41■□□□□ 0.06
HLA-DRAP01903 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AL359881.3-201ENST00000602640 1721 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 RNA5SP359-201ENST00000364838 113 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 HIST2H2BC-201ENST00000498492 580 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AL022334.2-201ENST00000610000 484 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 AC244093.1-201ENST00000610837 814 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AL157791.1-201ENST00000553667 1699 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 LINC01815-202ENST00000641468 1409 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AC005840.4-201ENST00000541242 2494 ntBASIC15.4■□□□□ 0.06
HLA-DRAP01903 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRAP01903 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HLA-DRAP01903 AGAP10P-201ENST00000454844 2418 ntBASIC15.39■□□□□ 0.05
HLA-DRAP01903 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DRAP01903 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 AC103592.1-201ENST00000394513 664 ntBASIC15.39■□□□□ 0.05
HLA-DRAP01903 ACTG1P2-201ENST00000415776 1125 ntBASIC15.39■□□□□ 0.05
HLA-DRAP01903 ACTG1P11-201ENST00000425411 1125 ntBASIC15.39■□□□□ 0.05
HLA-DRAP01903 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRAP01903 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms