Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 AL592076.1-201ENST00000424448 303 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 MAGEA5-201ENST00000446757 942 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.42□□□□□ -0.1
SMAD6O43541 KRT18P15-201ENST00000458108 1291 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.42□□□□□ -0.1
SMAD6O43541 AC103810.10-201ENST00000606504 343 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 AL021707.6-201ENST00000609212 491 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 AC103691.2-201ENST00000618824 433 ntBASIC14.42□□□□□ -0.1
SMAD6O43541 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMAD6O43541 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SMAD6O43541 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMAD6O43541 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMAD6O43541 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 AC026316.1-201ENST00000398900 414 ntBASIC14.41□□□□□ -0.1
SMAD6O43541 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.41□□□□□ -0.1
SMAD6O43541 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 AC138894.2-201ENST00000602838 371 ntBASIC14.41□□□□□ -0.1
SMAD6O43541 AC128714.1-201ENST00000637035 887 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms