Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.11■□□□□ 0.17
PIK3CDO00329 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.11■□□□□ 0.17
PIK3CDO00329 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.11■□□□□ 0.17
PIK3CDO00329 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PIK3CDO00329 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PIK3CDO00329 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 RCC2P1-201ENST00000452257 1476 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.1■□□□□ 0.17
PIK3CDO00329 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 ERP29P1-201ENST00000442902 706 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 SCARNA12-201ENST00000459155 270 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.1■□□□□ 0.17
PIK3CDO00329 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.1■□□□□ 0.17
PIK3CDO00329 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.1■□□□□ 0.17
PIK3CDO00329 DNM1P30-201ENST00000563586 452 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.1■□□□□ 0.17
PIK3CDO00329 RPL17P45-201ENST00000586289 509 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.1■□□□□ 0.17
PIK3CDO00329 AC087392.5-201ENST00000612517 489 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.1■□□□□ 0.17
PIK3CDO00329 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.1■□□□□ 0.17
PIK3CDO00329 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PIK3CDO00329 AC004554.1-201ENST00000422830 1468 ntBASIC16.1■□□□□ 0.17
PIK3CDO00329 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.09■□□□□ 0.17
PIK3CDO00329 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.09■□□□□ 0.17
PIK3CDO00329 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.09■□□□□ 0.17
PIK3CDO00329 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PIK3CDO00329 RPS2P36-201ENST00000456516 831 ntBASIC16.09■□□□□ 0.17
PIK3CDO00329 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.09■□□□□ 0.17
PIK3CDO00329 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 AP002803.1-201ENST00000528836 498 ntBASIC16.09■□□□□ 0.17
PIK3CDO00329 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PIK3CDO00329 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
PIK3CDO00329 MIR3147-201ENST00000577811 66 ntBASIC16.09■□□□□ 0.17
PIK3CDO00329 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.09■□□□□ 0.17
PIK3CDO00329 AC087045.2-201ENST00000606279 1003 ntBASIC16.09■□□□□ 0.17
PIK3CDO00329 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PIK3CDO00329 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.09■□□□□ 0.17
PIK3CDO00329 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PIK3CDO00329 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PIK3CDO00329 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms