Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 RNU1-114P-201ENST00000365297 166 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 C1QBPP1-201ENST00000400117 770 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 AL442647.2-201ENST00000429864 857 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 GIMAP3P-201ENST00000495150 836 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 AC026434.2-201ENST00000506094 1078 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 AC104596.2-201ENST00000512793 793 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC66A2RUB6 PCDHB17P-202ENST00000623466 3066 ntBASIC15.69■□□□□ 0.1
CCDC66A2RUB6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 SALL4P5-201ENST00000419001 1760 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 BASP1P1-201ENST00000430708 665 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC007969.1-201ENST00000433675 447 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC093004.1-201ENST00000508850 424 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC055876.2-201ENST00000531834 546 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC090505.1-201ENST00000430515 1834 ntBASIC15.68■□□□□ 0.1
CCDC66A2RUB6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC66A2RUB6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 MAPK10-262ENST00000641051 5738 ntBASIC15.67■□□□□ 0.1
CCDC66A2RUB6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC66A2RUB6 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms