Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL359091.4-201ENST00000610052 409 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AL118522.1-201ENST00000611368 560 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC018442.1-201ENST00000421439 2061 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AGAP7P-201ENST00000582299 2062 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AGAP14-201ENST00000624701 2060 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AL161772.1-201ENST00000610494 4412 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 FAM45BP-202ENST00000592932 1624 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PGAM1P12-201ENST00000505622 748 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 FAM86B3P-203ENST00000523992 854 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 DNM1P51-201ENST00000558149 522 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 RN7SL596P-201ENST00000582123 288 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AC055811.3-201ENST00000584952 686 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AP005264.6-204ENST00000588436 719 ntBASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC187A0A096LP49 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 CCT8L1P-201ENST00000465400 1674 ntBASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC104581.4-201ENST00000623126 3052 ntBASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AL135901.1-201ENST00000451812 333 ntBASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC008026.2-201ENST00000495438 348 ntBASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC095040.1-201ENST00000513286 675 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms