Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AC102953.2-201ENST00000609755 3026 ntBASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.82□□□□□ -0.52
RCL1Q9Y2P8 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL445250.1-201ENST00000641671 2259 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC114501.2-201ENST00000439631 535 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC036164.1-201ENST00000570544 333 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC073592.8-201ENST00000624126 511 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL359845.1-201ENST00000458202 1648 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AC087499.5-201ENST00000452760 1342 ntBASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.81□□□□□ -0.52
RCL1Q9Y2P8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 CES1P1-201ENST00000421606 1704 ntBASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
RCL1Q9Y2P8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms