Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AF254983.2-201ENST00000612331 135 ntBASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC006453.1-201ENST00000636037 1257 ntBASIC14.38□□□□□ -0.11
SPASTQ9UBP0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC113367.3-201ENST00000508316 1912 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC073150.1-201ENST00000450406 1084 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC116345.2-201ENST00000512837 523 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC242376.1-201ENST00000559033 726 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AL157813.1-201ENST00000612996 587 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 AC092053.3-201ENST00000641308 4975 ntBASIC14.37□□□□□ -0.11
SPASTQ9UBP0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.37□□□□□ -0.11
SPASTQ9UBP0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms