Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN18Q99952 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PTPN18Q99952 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 KRT18P15-201ENST00000458108 1291 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 RN7SL578P-201ENST00000477781 283 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 AC011431.1-201ENST00000512971 230 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 AP000920.1-201ENST00000531824 344 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN18Q99952 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN18Q99952 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN18Q99952 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.1■□□□□ 0.17
PTPN18Q99952 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN18Q99952 MIR8071-1-201ENST00000616769 65 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 MIR8071-2-201ENST00000616772 65 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 AC245369.7-201ENST00000631386 350 ntBASIC16.1■□□□□ 0.17
PTPN18Q99952 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN18Q99952 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN18Q99952 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PTPN18Q99952 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN18Q99952 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 U3.5-201ENST00000363448 216 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN18Q99952 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.09■□□□□ 0.17
PTPN18Q99952 FAM197Y6-201ENST00000420524 766 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.09■□□□□ 0.17
PTPN18Q99952 RPL18AP16-201ENST00000424057 531 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.09■□□□□ 0.17
PTPN18Q99952 COQ10BP2-201ENST00000513804 724 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 RN7SL524P-201ENST00000581152 300 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PTPN18Q99952 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.09■□□□□ 0.17
PTPN18Q99952 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN18Q99952 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 AC007950.2-201ENST00000615045 2347 ntBASIC16.09■□□□□ 0.17
PTPN18Q99952 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PTPN18Q99952 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN18Q99952 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN18Q99952 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN18Q99952 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN18Q99952 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN18Q99952 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN18Q99952 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN18Q99952 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN18Q99952 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PTPN18Q99952 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN18Q99952 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN18Q99952 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN18Q99952 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PTPN18Q99952 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN18Q99952 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN18Q99952 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN18Q99952 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN18Q99952 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms