Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AP000593.2-201ENST00000542775 1433 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ARSEP1-201ENST00000420443 635 ntBASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ELK1P1-201ENST00000485699 580 ntBASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SERBP1P5-201ENST00000510079 1181 ntBASIC12.6□□□□□ -0.39
CPNE2Q96FN4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 AC005586.2-201ENST00000563946 837 ntBASIC12.6□□□□□ -0.39
CPNE2Q96FN4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 AC064801.2-201ENST00000625052 1303 ntBASIC12.6□□□□□ -0.39
CPNE2Q96FN4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CPNE2Q96FN4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC011498.7-201ENST00000624986 2027 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 CICP16-201ENST00000502609 2813 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 AC012617.1-204ENST00000586340 2305 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 HSPA8P5-201ENST00000456928 2069 ntBASIC12.59□□□□□ -0.39
CPNE2Q96FN4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CPNE2Q96FN4 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms