Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
AP3S1Q92572 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
AP3S1Q92572 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S1Q92572 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S1Q92572 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 AL591424.1-201ENST00000442569 1213 ntBASIC12.7□□□□□ -0.38
AP3S1Q92572 KRT18P3-201ENST00000451602 1288 ntBASIC12.7□□□□□ -0.38
AP3S1Q92572 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 RNA5SP419-201ENST00000515908 135 ntBASIC12.7□□□□□ -0.38
AP3S1Q92572 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S1Q92572 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S1Q92572 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
AP3S1Q92572 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.7□□□□□ -0.38
AP3S1Q92572 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S1Q92572 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP3S1Q92572 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AP3S1Q92572 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 AC004870.1-201ENST00000315132 882 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms