Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AL008718.2-201ENST00000609206 1313 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 E2F3P2-201ENST00000447755 1422 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 RPS2P36-201ENST00000456516 831 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 SNORD3B-2-202ENST00000571722 791 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 MIR4722-201ENST00000578292 60 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 RN7SL574P-201ENST00000581512 297 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 MIR6727-201ENST00000620702 65 ntBASIC13.65□□□□□ -0.22
TM9SF4Q92544 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TM9SF4Q92544 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.65□□□□□ -0.22
TM9SF4Q92544 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TM9SF4Q92544 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TM9SF4Q92544 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
TM9SF4Q92544 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TM9SF4Q92544 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 ALG3P1-201ENST00000508806 1114 ntBASIC13.64□□□□□ -0.23
TM9SF4Q92544 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms