Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 PES1P2-201ENST00000449745 1735 ntBASIC17.06■□□□□ 0.32
SNED1Q8TER0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNED1Q8TER0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.06■□□□□ 0.32
SNED1Q8TER0 AC138932.1-201ENST00000534164 6830 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 PGK1P2-201ENST00000431702 1214 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 MIR2278-201ENST00000516344 96 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 KRT8P34-201ENST00000577607 1044 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 AL390755.1-201ENST00000623716 2027 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 WASH7P-201ENST00000488147 1351 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 AC113367.3-201ENST00000508316 1912 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 PKD1P1-201ENST00000458669 6805 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.05■□□□□ 0.32
SNED1Q8TER0 AL022313.4-201ENST00000562756 2046 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNED1Q8TER0 AC068760.1-201ENST00000493579 1953 ntBASIC17.05■□□□□ 0.32
SNED1Q8TER0 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 NHP2P1-201ENST00000335274 462 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 RN7SL351P-201ENST00000469306 248 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC006116.2-201ENST00000589958 988 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC026120.2-201ENST00000617239 309 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC020904.3-201ENST00000624199 442 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 EEF1DP5-201ENST00000431410 772 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 VDAC1P11-201ENST00000458323 852 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms